|
|---|
|
Files associated with Spartan, which may be customized to control various program functions as well as to set default values, are contained in the directory, spartanrc under the individual user's home directory. |
|
| bondlengths | Contains a listing of bond lengths used in the molecular mechanics minimizer in the expert builder. |
| colors | Sets background and atom colors as well as controls lighting model. Most colors may be set using Colors under the Wavefunction Logo menu and, change the values in the local copy of this file. |
| hosts | Contains a table of machines available to run the computational parts of Spartan. |
| interface | Contains default values for the dialogs inside of Spartan's graphical user interface. |
| preferences | Contains default values for a number of functions associated with Spartan's graphical user interface. Some preferences may be set using Preferences under the Logo menu and change the values in the local copy of this file. |
| server_init | Contains information needed for setting up host-server connections. |
| host_init | Contains information specifying the number of list members that can be run on a particular machine during a "basket" submission. |
| Files associated with Spartan defined by the root user are found under /var/spartan. | |
| job_limit | Sets the maximum number of jobs which can be run simultaneously. |
| queue | Contains the names of jobs which are currently running and currently pending. |
| sp_access | Contains hardware-specific Spartan access code. |
| spartan | Spartan run script. |
| A number of additional help files are found in the directory Notes. | |
| File_Formats | Information about the contents and formats of Spartan's internal molecule files. |
| Graphics_ideas | Further information about using Spartan's graphical generation and display capabilities. |
| Installing_Spartan | Installation instructions for Spartan. |
| Restarting_Jobs | Information for restarting jobs which have terminated abnormally. |
| Running_G94 | Information for running Gaussian 94 from Spartan, including information running Gaussian 94 on remote machines. |
| Spartan_Organization | Information relating to the scripts which control execution of Spartan. |
| Spartan_Queue | Information relating to setting up and using queues in Spartan. |
| Sybyl_types | Provides a complete listing of SYBYL atom types. |
| Using_X_Spartan | Information regarding the use of the X-Windows version of Spartan's graphical interface. |
| Spartan_Multiprocessor | Information relating to running Spartan on shared-memory multiprocessor machines. |
| Spartan_Multimachine | Information relating to running Spartan in a networked multiple machine environment. |