Spartan 5.1 User's Guide

Table of Contents

Jump to Chapter: 1 2 3 4 5 6 7.1 7.2 8.1 8.2 9 10 11

What's Different About Spartan 5.1?


Chapter 1

Introduction

SPARTAN

SPARTAN's Architecture

SPARTAN's Present Capabilities and Limitations

Hardware Platforms

1.0

1.1

1.2

1.3

1.3.1

1.3.2

1.3.3

1.3.4

1.3.5

1.3.6

1.4

Chapter 2

General Operating Features

Starting Spartan

Pull-Down Menus

Keystroke Equivalents

Use of the Mouse

Keyboard Functions

Molecule Selection

Lists of Molecules and Spreadsheets

3-Dimensional Displays

Iconifying Spartan

2.0

2.1

2.2

2.3

2.4

2.5

2.6

2.7

2.8

2.9

Chapter 3

The Logo Menu

About Spartan

Color

Preferences

Print Setup

Monitor

Periodic Table

Calculator

3.0

3.1

3.2

3.3

3.4

3.5

3.5.1

3.5.1.1

3.5.1.2

3.5.1.3

3.5.1.4

3.5.1.5

3.6

3.7

Chapter 4

The File Menu

New

Open

Close

Save

Save As

Merge As

Group As

Delete

Import

Export

Print

Quit

4.0

4.1

4.2

4.3

4.4

4.5

4.6

4.7

4.8

4.9

4.10

4.11

4.12

Chapter 5

The Model Menu

Wire

Ball and Wire

Tube

Ball and Spoke

Space Filling

Polyhedra

Hide

Hydrogens

Labels

Edit Labels

Annotate

Box

5.0

5.1

5.2

5.3

5.4

5.5

5.5.5

5.6

5.7

5.8

5.9

5.9.5

5.10

Chapter 6

The Geometry Menu

Distance

Angle

Dihedral

Freeze Center

Constrain Distance

Contrain Angle

Constrain Dihedral

Define Point

Define Plane

Surface Area

Volume

Report Symmetry

Report Chirality

6.0

6.1

6.2

6.3

6.4

6.5

6.6

6.7

6.8

6.9

6.10

6.11

6.12

6.12

Chapter 7

The Build Menu

Edit Structure

Conformer Search

Transition Search

Vibration Sequence

Coordinate Driving

Combinatorial Study

Isotopes

7.0

7.1

7.1.1

7.1.2

7.1.3

7.1.4

7.1.5

7.1.6

7.1.7

7.1.7.1

7.1.7.2

7.1.7.3

7.1.7.4

7.1.7.5

7.1.7.6

7.2

7.2.1

7.2.2

7.2.2.1

7.2.2.2

7.2.2.3

7.2.2.4

7.2.2.5

7.3

7.3.1

7.3.2

7.3.2.1

7.3.2.2

7.3.2.3

7.3.2.4

7.3.2.5

7.3.3

7.4

7.4.1

7.4.2

7.4.2.1

7.4.2.2

7.4.2.3

7.4.2.4

7.4.2.5

7.5

7.5.1

7.5.2

7.5.2.1

7.5.2.2

7.5.2.3

7.5.2.4

7.5.2.5

7.6

7.6.1

7.6.2

7.6.2.1

7.6.2.2

7.6.2.3

7.6.2.4

7.6.2.5

7.7

Chapter 8

The Setup Menu

Lists

Ab Initio

Density Functional

Semi-Empirical

Mechanics

External

Properties

Surfaces and Volumes

Standard

Submit

8.0

8.1

8.2

8.3

8.4

8.4.1

8.5

8.5.1

8.6

8.6.1

8.7

8.8

8.8.1

8.8.2

8.9

8.9.1

8.9.2

8.10

Chapter 9

The Display Menu

Output

Properties

Surfaces

Slices

Isosurfaces

Vibration

9.0

9.1

9.2

9.2.1

9.2.2

9.2.3

9.2.4

9.2.5

9.2.6

9.2.7

9.2.8

9.3

9.4

9.4.1

9.4.2

9.4.3

9.4.4

9.5

9.5.1

9.5.2

9.5.3

9.6

Chapter 10

The Help Menu

Use of the Mouse

Keystroke Equivalents

Ab Initio Options

Density Functional Options

Semi-Empirical Options

Mechanics Options

Properties Options

Graphics Options

Conformer Options

Available Elements

10.0

10.1

10.2

10.3

10.4

10.5

10.6

10.7

10.8

10.9

10.10

Chapter 11

Spartan's Spreadsheet

Spreadsheet Operations

Menus in the Spreadsheet

11.0

11.1

11.2

11.2.1

11.2.2

11.2.3

11.2.4

11.2.5

Appendix A:

Files Associated with SPARTAN

 

Appendix B:

Units Used in SPARTAN

 

Index:

Index

 

Index:

SPARTAN Keywords

 


Citations:

SPARTAN Citation (Previously "Appendix A")

 

Glossary:

Glossary.

 


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